Journals in Gene structure expression and regulation
Journals in Gene structure expression and regulation
Biochimica et Biophysica Acta: Proteins and Proteomics
BBA Proteins and Proteomics covers protein structure conformation and dynamics; protein folding; protein-ligand interactions; enzyme mechanisms, models and kinetics; protein physical properties and spectroscopy; and proteomics and bioinformatics analyses of protein structure, protein function, or protein regulation.The journal no longer considers manuscripts dealing with binding of compounds such as drugs or drug analogues to circulatory proteins such as serum albumin. These studies are better accommodated in journals dealing with drug design and development.Manuscri... must advance our insights into the molecular and mechanistic properties of proteins. Computational studies must generally be validated or complemented by experimental studies. Studies only consisting of computational work will not be considered unless they provide new theoretical insight that allows us to better understand or reinterpret surprising or unexpected experimental data.Comparative proteomics studies are generally not considered for review unless they provide specific insights into the structural and/or functional properties of individual proteins. Proteomics studies must also address properties of individual proteins and should as far as possible be validated by direct investigations of relevant identified proteins.Concise and comprehensive reviews of recent developments are considered for publication. However, authors are strongly advised to consult one of the Executive Editors before starting a review.Please see our Guide for Authors for information on article submission. If you require any further information or help, please visit our Support Center- ISSN: 1570-9639
Molecular and Biochemical Parasitology
Molecular and Biochemical Parasitology provides a medium for rapid publication of investigations of the molecular biology and biochemistry of parasitic protozoa, fungi, helminths and ectoparasites, including molecular interactions between parasites and their definitive and intermediate hosts and their vectors. This includes emerging or neglected eukaryotic pathogens.The main subject areas covered are:• The structure, biosynthesis, degradation, properties and function of parasite biomolecules - DNA, RNA, proteins, lipids, carbohydrates and small molecular-weight substances. This includes molecules of intermediary metabolism and bioenergetics. host-parasite relationships particularly as related to specific parasite molecules. • The response of host organisms to infection, and the response of host cells to intracellular parasites. Included are studies on the detailed molecular mechanisms of anti-parasitic immune responses, parasite immune evasion, and host-pathogen signalling pathways.• “Omics” technologies and systems biology, including genomics, transcriptomics, proteomics, metabolomics, and epigenomics of parasites and the host’s response to infection.• Vector-parasite relationships at the molecular level; this includes molecular studies on arthropod vectors that transmit parasites, especially those focusing on vector-parasite interactions, vector immunity, and vector control strategies.• Structural studies of parasite proteins and their interactions. • Drug target characterization and the mode of action of antiparasitic drugs; mechanisms of drug resistance; novel therapeutics including natural products, synthetic compounds, and vaccine candidates. Please note that studies that are restricted to in silico docking of compounds or other purely computational approaches will not be accepted in the absence of some experimental validation.• Analysis of variation in parasite populations relevant to genetic exchange, pathogenesis, drug and vaccine target characterization, and drug resistance; please note that genetic variation data must be supported by phenotypic/experimen... data showing the effect of the variation, and that papers reporting solely on allele frequencies in specific regions will not be accepted.• Parasite protein trafficking, organelle and membrane biogenesis, and cellular structure especially with reference to the roles of specific molecules• Parasite programmed cell death, development, and cell division at the molecular level• Parasitic disease diagnostics, especially molecular diagnostics, biomarkers, and biosensors for parasite detection and disease monitoring.•Microbiomes of parasites, symbiotic relationships, and how microbiota influence parasite development and pathogenicity.• Environmental molecular parasitology, including studies linking molecular parasitology with ecological and environmental factors influencing parasite transmission, adaptation, and evolution.• Methods reports - descriptions of novel or newly-optimized methods with broad applicability to molecular and biochemical parasitologyPapers will only be accepted for publication if they fall within these areas, if they contain original and complete work of high scientific quality, and if they are well presented and clearly written in scientific English. Papers solely confirming the conserved functions of genes previously studied in other organisms will not be considered. We welcome short communications documenting a succinct but clear and important advance.- ISSN: 0166-6851
Biochimica et Biophysica Acta: Bioenergetics
BBA Bioenergetics covers the area of biological membranes involved in energy transfer and conversion. In particular, it focuses on elucidating molecular mechanisms and structure-function relationships of bioenergetic components of photosynthesis, mitochondrial and bacterial respiration, oxidative phosphorylation, and motility and transport, as well as their structural aspects. The journal spans applications of advanced biochemical and biophysical approaches, including spectroscopy, structural biology, and molecular modeling in these systems. Additionally, it addresses bioenergetic aspects of mitochondrial biology, including biomedical aspects of energy metabolism, also related to mitochondrial disorders and neurodegenerative diseases.Please see our Guide for Authors for information on article submission. If you require any further information or help, please visit our Support Center.- ISSN: 0005-2728
Gene Expression Patterns
Gene Expression Patterns is devoted to the rapid publication of high quality studies of gene expression in development. Studies using cell culture are also suitable if clearly relevant to development, e.g., analysis of key regulatory genes or of gene sets in the maintenance or differentiation of stem cells. Key areas of interest include:In-situ studies such as expression patterns of important or interesting genes at all levels, including transcription and protein expressionTemporal studies of large gene sets during developmentTransgeni... studies to study cell lineage in tissue formation"Omic" studies: In addition of the aims described above, Gene Expression Patterns will publish "Omics" studies (genomics, transcriptomic, proteomics, including single cell RNAseq, etc) relevant for embryo development.- ISSN: 1567-133X
Biochimica et Biophysica Acta: Molecular Basis of Disease
BBA Molecular Basis of Disease addresses the biochemistry and molecular genetics of disease processes and models of human disease.Manuscripts should emphasize the underlying molecular mechanisms of human disease pathways and provide significant advances to the understanding and/or treatment of these disorders.Studies in model organisms or systems are strongly recommended in order to validate mechanistic insights. Topics of interest include, but are not limited toAgingCancerCardiov... diseasesCell death–related diseasesGenetic diseasesGenetic and epigenetic regulation in diseasesImmunologica... diseasesInflammatory diseasesMetabolic diseasesMitochondria... diseasesMuscular diseasesNeurological diseasesThe non-preferred topics for BBADIS includeNon-coding RNAsResearch on non-coding RNAs (microRNAs, lncRNAs, circRNAs, etc.) will be considered only if it provides significantly novel insights into disease mechanisms.Single Cell Line StudiesStudies involving single cell lines will be considered only if they present significantly novel findings.Computation... (in Silico) StudiesPurely computational works (e.g., Mendelian randomization, molecular docking, molecular dynamics) will generally be declined unless they provide novel insights into disease mechanisms.Disease BiomarkersResearch on disease biomarkers will be considered only if it relates to the explanation of disease mechanisms.Descripti... or Correlative StudiesDescriptive or correlative studies (e.g., up/down regulation of gene products, -omics studies without follow-up experiments) will be declined unless they provide mechanistic insights.Natural Products and Traditional MedicineWork on natural products, extracts, and traditional medicine will be considered only if single biochemical components are characterized and tested.Clinical Studies and Case ReportsClinical studies or case reports without mechanistic insights are outside the scope of the journal.Hypothesis ArticlesSubmissions based solely on hypotheses will not be considered.Comparati... Genomics StudiesComparative genomics studies (e.g., GWAS) will only be considered if they provide specific insights into the structural and/or functional properties of individual genes.Incremental WorkResearch that offers incremental advancements without significant novelty or impact will generally be declined.- ISSN: 0925-4439
Biochimica et Biophysica Acta: Gene Regulatory Mechanisms
BBA Gene Regulatory Mechanisms includes reports that describe novel insights into mechanisms of transcriptional, post-transcriptional and translational gene regulation. Special emphasis is placed on papers that identify epigenetic mechanisms of gene regulation, including chromatin, modification, and remodeling. This section also encompasses mechanistic studies of regulatory proteins and protein complexes; regulatory or mechanistic aspects of RNA processing; regulation of expression by small RNAs; genomic analysis of gene expression patterns; and modeling of gene regulatory pathways. Papers describing gene promoters, enhancers, silencers or other regulatory DNA regions must incorporate significant functions studies.The journal does not favorably review manuscripts identifying a miRNA-target pair without additional insights into the repression mechanism or significant advances in understanding regulatory pathways. In addition, the following elements should be an integral part of the study: •In silico prediction of miRNA targets must be experimentally verified using appropriate luciferase constructs and assays; •To exclude non-functional miRNA/mRNA interactions a reporter system including the whole 3'UTR of the target gene downstream the "luciferase" or GFP should be considered; •Any miRNA modulation should be validated by measuring the expression of the putative proteinPlease see our Guide for Authors for information on article submission. If you require any further information or help, please visit our Support Center- ISSN: 1874-9399
Journal of Biotechnology
The Journal of Biotechnology (J. Biotech.) offers publication for both full-length articles and short communications on a wide range of biotechnology-relate... topics. Also, review articles can be submitted if they are pre-approved by one of the editors. The journal will only accept submissions with novel scientific research results that are directly relevant to biotechnological systems and/or applications (for details, please see the list below). J. Biotech. has strict rules about plagiarism. Any submission that includes parts of already published material will be rejected. This includes any attempt to re-publish already published Materials and Methods paragraphs. The journal features a "one-pass review process," i.e., eligible submissions will be reviewed, and those that need improvements (either minor or major) can be resubmitted only once before the decision about whether to accept or reject is decided by the Chief Editor. All figures need to be submitted as high-resolution files during the initial submission. All articles must be written in English, and the quality of the English language will be one of the criteria during the review process.Main Scope of the Journal:Bioprocess engineeringSystem biology, synthetic microbiologyMetaboli... engineering, microbial physiologyBiorefiner... biomass engineeringBiochemic... enzyme/protein engineeringMetabolic engineeringMicrobial expression systemsBiocatalyst engineeringInsect cell-based modelsMultienzyme cascade reactionsPlant-based biotechnologyOutside of the Scope:Manuscripts lacking noveltyReview articles submitted without previous invitation/confirmat... by an editorEnvironmental-... subjects, e.g., waste-water treatment, bioremediation, biodegradationReport... on the cloning and/or expression of naturally occurring enzymes without direct biotechnological applicationResearch on natural products without biotechnological modificationToxicolo... researchPharmacologi... researchFood science-related research without biotechnological applicationEngineeri... articles that do not deal with the direct improvement of biotechnological processesGenome research, especially genome sequencing reports- ISSN: 0168-1656
Experimental Parasitology
The main focus of Experimental Parasitology is experimental approaches to investigating different aspects of parasitology, including, but not limited to, those encompassed by molecular tools, cell biology, and immunology. The journal predominantly publishes Original Research Papers in which experimentation is used to investigate the physiological, metabolic, immunological, biochemical, nutritional, and chemotherapeutic aspects of parasites and host-parasite relationships. In addition, the journal welcomes Method Papers that describe new approaches to such investigations and Review Articles (short reviews, full reviews, and systematic reviews) that provide critical evaluation of published articles on a theme within the scope of the journal. Furthermore, the journal is open to publishing special issues or meeting reports within the themes of the journal. Please contact the editors for further information. See our Guide for Authors for further information on the different paper types accepted by Experimental Parasitology.- ISSN: 0014-4894
Cells & Development
Cell and Developmental Biology and their Quantitative approaches The Official Journal of The International Society of Developmental BiologistsCells & Development is an international journal covering the areas of cell biology and developmental biology. In addition to publishing work at the interphase of these two disciplines, we also publish work that is purely cell biology as well as classical developmental biology.C&D is the official journal of The International Society of Developmental Biologists (ISDB) which supports the world-wide community of developmental biologists.Cells & Development will consider papers in any area of cell biology or developmental biology, in any model system like animals and plants, using a variety of approaches, such as cellular, biomechanical, molecular, quantitative, computational and theoretical biology.Areas of particular interest include:Cell and tissue morphogenesisCell adhesion and migrationCell shape and polarityBiomechanics... modelling of cell and developmental biologyQuantitative biologyStem cell biologyCell differentiationCell proliferation and cell deathEvo-DevoMembran... trafficMetabolic regulationOrgan and organoid developmentRegenerat... at the interface of physics and biology often include theoretical work which is summarised in a short form in a Supplementary Text or Supplementary Theory. Authors may want to further describe, extend and give higher visibility to the theoretical work that they have published in this way. We are therefore pleased to announce that Cells & Development will now consider submissions of extended and more detailed versions of Supplementary Theory material published in other biological or generalist journals. To be considered, these articles must introduce significant additional material and discussion of previously published results. They must explicitly refer to the article where the Supplementary Theory text was originally published. Reproduction of the previously published figures or text materials should be minimal and appropriately referenced, in accordance with copyright requirements of the other journal.With this initiative, Cells & Development is aiming at promoting quantitative approaches to biology by giving the opportunity to theorists to better explain and highlight their contribution to multidisciplinary studies.Cells & Development does not publish descriptive studies of gene expression patterns and molecular screens; for submission of such studies see Gene Expression Patterns .- ISSN: 0925-4773
Cells & Development
Cell and Developmental Biology and their Quantitative approaches The Official Journal of The International Society of Developmental BiologistsCells & Development is an international journal covering the areas of cell biology and developmental biology. In addition to publishing work at the interphase of these two disciplines, we also publish work that is purely cell biology as well as classical developmental biology.C&D is the official journal of The International Society of Developmental Biologists (ISDB) which supports the world-wide community of developmental biologists.Cells & Development will consider papers in any area of cell biology or developmental biology, in any model system like animals and plants, using a variety of approaches, such as cellular, biomechanical, molecular, quantitative, computational and theoretical biology.Areas of particular interest include:Cell and tissue morphogenesisCell adhesion and migrationCell shape and polarityBiomechanics... modelling of cell and developmental biologyQuantitative biologyStem cell biologyCell differentiationCell proliferation and cell deathEvo-DevoMembran... trafficMetabolic regulationOrgan and organoid developmentRegenerat... at the interface of physics and biology often include theoretical work which is summarised in a short form in a Supplementary Text or Supplementary Theory. Authors may want to further describe, extend and give higher visibility to the theoretical work that they have published in this way. We are therefore pleased to announce that Cells & Development will now consider submissions of extended and more detailed versions of Supplementary Theory material published in other biological or generalist journals. To be considered, these articles must introduce significant additional material and discussion of previously published results. They must explicitly refer to the article where the Supplementary Theory text was originally published. Reproduction of the previously published figures or text materials should be minimal and appropriately referenced, in accordance with copyright requirements of the other journal.With this initiative, Cells & Development is aiming at promoting quantitative approaches to biology by giving the opportunity to theorists to better explain and highlight their contribution to multidisciplinary studies.Cells & Development does not publish descriptive studies of gene expression patterns and molecular screens; for submission of such studies see Gene Expression Patterns .- ISSN: 2667-2901