Journals in Nucleic acids

Biochimica et Biophysica Acta: Gene Regulatory Mechanisms

ISSN: 1874-9399

BBA Gene Regulatory Mechanisms includes reports that describe novel insights into mechanisms of transcriptional, post-transcriptional and translational gene regulation. Special emphasis is placed on papers that identify epigenetic mechanisms of gene regulation, including chromatin, modification, and remodeling. This section also encompasses mechanistic studies of regulatory proteins and protein complexes; regulatory or mechanistic aspects of RNA processing; regulation of expression by small RNAs; genomic analysis of gene expression patterns; and modeling of gene regulatory pathways. Papers describing gene promoters, enhancers, silencers or other regulatory DNA regions must incorporate significant functions studies.The journal does not favorably review manuscripts identifying a miRNA-target pair without additional insights into the repression mechanism or significant advances in understanding regulatory pathways. In addition, the following elements should be an integral part of the study: •In silico prediction of miRNA targets must be experimentally verified using appropriate luciferase constructs and assays; •To exclude non-functional miRNA/mRNA interactions a reporter system including the whole 3'UTR of the target gene downstream the "luciferase" or GFP should be considered; •Any miRNA modulation should be validated by measuring the expression of the putative proteinPlease see our Guide for Authors for information on article submission. If you require any further information or help, please visit our Support Center

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Biochimie

ISSN: 0300-9084

An International Journal of Biochemistry and Molecular BiologyPublished under the auspices of the Société Française de Biochimie et Biologie Moléculaire.Biochimi... publishes original research articles, short communications, review articles, graphical reviews, mini-reviews, and hypotheses in the broad areas of biology, including biochemistry, enzymology, molecular and cell biology, metabolic regulation, genetics, immunology, microbiology, structural biology, genomics, proteomics, and molecular mechanisms of disease. Biochimie publishes exclusively in English.Articles are subject to peer review, and must satisfy the requirements of originality, high scientific integrity and general interest to a broad range of readers. Submissions that are judged to be of sound scientific and technical quality but do not fully satisfy the requirements for publication in Biochimie may benefit from a transfer service to a more suitable journal within the same subject area.

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Cells & Development

ISSN: 0925-4773

Cell and Developmental Biology and their Quantitative approaches The Official Journal of The International Society of Developmental BiologistsCells & Development is an international journal covering the areas of cell biology and developmental biology. In addition to publishing work at the interphase of these two disciplines, we also publish work that is purely cell biology as well as classical developmental biology.C&D is the official journal of The International Society of Developmental Biologists (ISDB) which supports the world-wide community of developmental biologists.Cells & Development will consider papers in any area of cell biology or developmental biology, in any model system like animals and plants, using a variety of approaches, such as cellular, biomechanical, molecular, quantitative, computational and theoretical biology.Areas of particular interest include:Cell and tissue morphogenesisCell adhesion and migrationCell shape and polarityBiomechanics... modelling of cell and developmental biologyQuantitative biologyStem cell biologyCell differentiationCell proliferation and cell deathEvo-DevoMembran... trafficMetabolic regulationOrgan and organoid developmentRegenerat... at the interface of physics and biology often include theoretical work which is summarised in a short form in a Supplementary Text or Supplementary Theory. Authors may want to further describe, extend and give higher visibility to the theoretical work that they have published in this way. We are therefore pleased to announce that Cells & Development will now consider submissions of extended and more detailed versions of Supplementary Theory material published in other biological or generalist journals. To be considered, these articles must introduce significant additional material and discussion of previously published results. They must explicitly refer to the article where the Supplementary Theory text was originally published. Reproduction of the previously published figures or text materials should be minimal and appropriately referenced, in accordance with copyright requirements of the other journal.With this initiative, Cells & Development is aiming at promoting quantitative approaches to biology by giving the opportunity to theorists to better explain and highlight their contribution to multidisciplinary studies.Cells & Development does not publish descriptive studies of gene expression patterns and molecular screens; for submission of such studies see Gene Expression Patterns .

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DNA Repair

ISSN: 1568-7864

DNA Repair (DNAREP) is a journal focusing on DNA repair and cellular responses to DNA damage. DNA Repair publishes articles on genetic, cellular, biochemical, structural and molecular aspects of DNA repair. The journal welcomes articles describing databases, methods and new technologies supporting research on DNA repair and responses to DNA damage. Letters to the Editor, hot topics and classics in DNA repair, historical reflections, book reviews and meeting reports will also be considered for publication.The journal publishes topics directly pertaining to DNA damage and repair, which include:ApoptosisBio... responses to genomic insultCell cycle regulationCell fate decisionsEpigenetics and chromatinGenomics/bi... diseases: aging, cancer, and neurological dysfunctionImmune responsesMutagenesis & signature mutationsStructural biology and computational modeling

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Gene

ISSN: 0378-1119

Gene publishes papers that focus on the regulation, expression, function, and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses.Gene supports open access and strives to be an international and diverse journal.The following topics, each headed up by a Section Editor who is an expert in the field, are considered for publication:Human Genetics: Encompasses the fields of molecular genetics, cytogenetics, biochemical genetics, population genetics, evolutionary genetics, developmental genetics, and clinical genetics. We welcome articles aimed at understanding the molecular basis of human diseases, the genetic diversity and evolution of human populations, and the developmental processes that shape human phenotypes (applications in medicine, biotechnology, forensics, anthropology, and bioethics).Cancer Genetics: We welcome high-quality scientific papers on the cellular, genetic and molecular aspects of cancer, including cancer predisposition and clinical diagnostic applications. Specific areas of interest include descriptions of new chromosomal, molecular, or epigenetic alterations in benign and malignant diseases; novel laboratory approaches for identification and characterization of chromosomal rearrangements or genomic alterations in cancer cells; correlation of genetic changes with pathology and clinical presentation; and the molecular genetics of cancer predisposition.Neuro... The focus is to understand how genetic variations influence the structure and activity of neurons, glia, and neural circuits, as well as how they affect the risk and progression of neurological and psychiatric disorders. We also welcome articles, reviews, and short communications on gene expression and regulation that are modulated by environmental factors and neural activity and how gene therapy can be used to treat or prevent neurological diseases.Animal Genetics: We welcome original manuscripts, reviews, and short reports on frontline research on the molecular genetics, functional genomics, and microbiomics of livestock, marine animals, wildlife, and laboratory animals. Publications may include studies of variation in proteins, metabolomes, genes, transcriptomes, and genomes in relation to phenotypes, mapping of traits gene editing, genetic diversity and epidemiology, epigenetics, epigenomics, multi-omics, and microbiomes.Some of the topics that animal genetics covers are - Inheritance: How genes are passed from parents to offspring and how they determine the physical and behavioral features of animals. - Variation: How genes interact with each other and with the environment to create differences among individuals and populations of animals. - Selection: How natural or artificial forces affect the frequency and distribution of genes and traits in animal populations. - Genetic engineering: How biotechnology can modify the genetic makeup of animals for various purposes, such as improving disease resistance, enhancing performance, or creating transgenic animals. - Genetic testing: How molecular techniques can identify the genetic status of animals for diagnosis, screening, or identification purposes.Genome Editing: We welcome submissions within the field of gene editing, covering various document types, such as reviews, research papers, or short communications on the latest findings and translational research in this evolving area.The broad focus of this section encompassesInvestiga... into the regulatory mechanisms of gene editing, exploration of genetic pathways, and specific genes impacting gene editing in both prokaryotic and eukaryotic systemsGene editing of somatic and stem cells for all organismsTherapeutic development of novel gene editing tools for the treatment of cancer and inherited diseasesDevelopment of new research tools, such as single-agent applications with oligonucleotides and programmable nucleases, including but not limited to CRISPR/Cas systemsInnovation concerning biomolecular tools that advance genetic engineering objectivesAdditional... we encourage the submission of reviews or research articles describing the appropriate use of gene editing in eukaryotic and prokaryotic organisms, with a special emphasis on ethical regulation and guidance provided by the appropriate regulatory agencies.Molecular Ecology: We welcome articles, reviews, and short communications that investigate how environmental factors affect the distribution and abundance of species; how species respond to climate change, habitat fragmentation, and invasive species; how gene expression and epigenetics influence phenotypic variation and plasticity; and how hybridization and introgression shape the genetic structure and speciation of populations. We also aim at publishing articles, reviews, and short communications that address molecular ecology, which provides insights into the ecological and evolutionary processes that shape biodiversity and the functioning of ecosystems.Plant Genetics: We welcome manuscripts, reviews, short communication that focus on the molecular mechanisms and evolutionary processes that shape the diversity and function of plant genomes. Topics may include the use of various tools and techniques, such as molecular markers, gene editing, transcriptomics, proteomics, and bioinformatics to investigate the structure, expression, regulation, and interaction of plant genes. Also, applications in agriculture, biotechnology, medicine, and conservation are of interest to Gene.Parasitology and Virology: The focus of this branch is to understand the biology and diversity of parasites and viruses, to identify their modes of transmission and pathogenesis, to develop diagnostic tools and preventive measures, and to find effective treatments and vaccines.We aim at publishing research papers, reviews, and communications related to parasite biology, with particular attention to the effects and physiological alterations to their hosts and vectors and to the strategies implemented by parasites to transmit between hosts and counteract their immune defenses.Microbiolog... We welcome articles, reviews, and short communications that investigate microbiology in relation to applications in medicine, biotechnology, agriculture, food safety, and environmental engineering.Out of scope areComputational/bio... studies without solid experimental validation of the computed findingsCase report studies reporting solely descriptive observations with no genetic implicationsMendelia... randomization studies and meta-analysesAny descriptive study that has no genetic implicationsGene is part of the Gene Family, and you are welcome to submit toGene Reports (Impact Factor 1.3)Human Gene (Impact Factor 0.7)Plant Gene (under Impact Factor review)

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Gene Expression Patterns

ISSN: 1567-133X

Gene Expression Patterns is devoted to the rapid publication of high quality studies of gene expression in development. Studies using cell culture are also suitable if clearly relevant to development, e.g., analysis of key regulatory genes or of gene sets in the maintenance or differentiation of stem cells. Key areas of interest include:In-situ studies such as expression patterns of important or interesting genes at all levels, including transcription and protein expressionTemporal studies of large gene sets during developmentTransgeni... studies to study cell lineage in tissue formation"Omic" studies: In addition of the aims described above, Gene Expression Patterns will publish "Omics" studies (genomics, transcriptomic, proteomics, including single cell RNAseq, etc) relevant for embryo development.

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International Journal of Biological Macromolecules

ISSN: 0141-8130

Structure, Function and InteractionsThe International Journal of Biological Macromolecules is an established international journal of research into chemical and biological aspects of all natural macromolecules.It presents the latest findings of studies on the molecular structure and properties of proteins, macromolecular carbohydrates, glycoproteins, proteoglycans, lignins, biological poly-acids, and nucleic acids. These findings must be new and novel rather than a repeat of earlier or analogous published work. The scope includes biological activities and interactions, molecular associations, chemical and biological modifications, and functional properties. Papers on related model systems, structural conformational studies, theoretical developments and new analytical techniques are also welcome. All papers are required to focus primarily on at least one named biological macromolecule. This naming should appear in the title, the abstract and the text of the paper.Examples of papers which are not appropriate for International Journal of Biological Macromolecules include: Papers in which the biological macromolecule has not been characterized by modern analytical techniques (including molecular weight) rather than historical methods, e.g. colorimetric assaysPapers that focus on biological, physiological and pharmacological aspects of non-macromolecules attached to, or mixed with, biological macromoleculesPapers on the materials science of biocomposites in which there is no mention of any specific biological macromoleculePapers in which the structure or role of the biological macromolecule is not the major proportion of the studyRoutine studies of extraction of macromolecules without purification and characterization of the extracted moleculeApplications of macromolecules in which the structure of the macromolecule is completely unknownPapers in which the molecular weight of the biological molecule is less than five thousandPapers that are majorly about clinical studies and animal trials, in which a biological macromolecule is not the biologically active agent and/or the biological macromolecule is not the major focus of the studyPapers that focus on genes and genomes with the respective data analysis (including bioinformatics and phylogenetic analyses) without the investigation of the molecular structure of the biological macromolecule and the direct evidence of its biological function

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Journals in Nucleic acids

Biochimica et Biophysica Acta: Gene Regulatory Mechanisms

Biochimie

Cells & Development

DNA Repair

Gene

Gene Expression Patterns

International Journal of Biological Macromolecules