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Peptide, Protein and Enzyme Design

  • 1st Edition, Volume 580 - August 27, 2016
  • Latest edition
  • Editor: Vincent L Pecoraro
  • Language: English

De Novo Enzyme Design, the newest volume in the Methods in Enzymology series, continues the legacy of this premier serial with quality chapters authored by leaders in the field. Th… Read more

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Description

De Novo Enzyme Design, the newest volume in the Methods in Enzymology series, continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume includes the design of metal binding maquettes, insertion of non-natural cofactors, Cu metallopeptides, non-covalent interactions in peptide assemblies, peptide binding and bundling, heteronuclear metalloenzymes, florinated peptides, De Novo imaging agents, and protein-protein interaction.

Key features

  • Continues the legacy of this premier serial with quality chapters on de novo enzyme design
  • Represents the newest volume in the Methods in Enzymology series, providing premier, quality chapters authored by leaders in the field
  • Ideal reference for those interested in the study of enzyme design that looks at both structure and mechanism

Readership

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Table of contents

1. Chemical Post-Translational Modification with Designed Rhodium(II) Catalysts
Samuel C. Martin, Matthew B. Minus and Zachary T. Ball

2. Cell Binding Assays for Determining the Affinity of Protein-Protein Interactions: Technologies and Considerations
Sean Hunter and Jennifer Cochran

3. Protein and Antibody Engineering by Phage Display
Julia C. Frei and Jonathan R. Lai

4. Incorporation of Unnatural Amino Acids into Proteins Expressed in Mammalian Cells
Robert Serfling and Irene Coin

5. Method for Enzyme Design with Genetically Encoded Unnatural Amino Acids
Cheng Hu and Jiangyun Wang

6. Methods for Solving Highly Symmetric De Novo Designed Metalloproteins: Crystallographic Examination of a Novel Three Stranded Coiled Coil Structure Containing D-Amino Acids
Leela Ruckthong, Jeanne A. Stuckey and Vincent L. Pecoraro

7. SpyRings Declassified: A Blueprint for using Isopeptide-Mediated Cyclization to Enhance Enzyme Thermal Resilience
Christopher Schoene, S. Paul Bennett and Mark Howarth

8. Engineering and Application of LOV2-Based Photoswitches
Seth Parker Zimmerman, Brian Kuhlman and Hayretin Yumerefendi

9. Minimalist Design of Allosterically Regulated Protein Catalysts
Olga V. Makhlynets and Ivan V. Korendovych

10. Combining Design and Selection to Create Novel Protein-Peptide Interactions
Elizabeth B. Speltz, Nicholas Sawyer and Lynne Regan

11. Metal-Directed Design of Supramolecular Protein Assemblies
Jake B. Bailey, Rohit H. Subramanian, Lewis A. Churchfield and F. Akif Tezcan

12. Designing Fluorinated Proteins
E. Neil G. Marsh

13. Solid Phase Synthesis of Helically Folded Aromatic Oligoamides
Simon J. Dawson, Xiaobo Hu, Stijn Claerhout and Ivan Huc

14. Conformational Restriction of Peptides Using Dithiol Bis-Alkylation
Leila Peraro, Timothy R. Siegert and Joshua A. Kritzer

15. Engineering Short Pre-Organized Peptide Sequences for Metal Ion Coordination: Copper(II) a Case Study
Luís M. P. Lima and Olga Iranzo

16. De Novo Construction of Redox Active Proteins
C. C. Moser, M. M Sheehan, N. M. Ennist, G. Kodali, C. Bialas, M. T. Englander, B. M. Discher and P. L. Dutton

17. Design Strategies for Redox Active Metalloenzymes: Applications in Hydrogen Production
Rafael Alcala-Torano, Dayn Joseph Sommer, Zahra Bahrami Dizicheh and Giovanna Ghirlanda

18. Equilibrium Studies of Designed Metalloproteins
Brian R. Gibney

19. Reconstitution of Heme Enzymes with Artificial Metalloporphyrinoids
Koji Oohora and Takashi Hayashi

20. Creation of a Thermally Tolerant Peroxidase
Yoshihito Watanabe and Hiroshi Nakajima

21. Designing Covalently Linked Heterodimeric Four-Helix Bundles
Marco Chino, Linda Leone, Ornella Maglio and Angela Lombardi

22. Design of Heteronuclear Metalloenzymes
Ambika Bhagi-Damodaran,Parisa Hosseinzadeh, Evan Mirts, Julian Reed, Igor D. Petrik and Yi Lu

23. Periplasmic Screening for Artificial Metalloenzymes
Markus Jeschek, Sven Panke and Thomas R. Ward

24. De Novo Designed Imaging Agents Based on Lanthanide Peptides Complexes
Anna F. A. Peacock

25. Peptide Binding for Bio-Based Nanomaterials
Nicholas M. Bedford, Catherine Munro and Marc R. Knecht

Review quotes

Praise for the Series:
"Should be on the shelves of all libraries in the world as a whole collection."—Chemistry in Industry
"The work most often consulted in the lab."—Enzymologia
"The Methods in Enzymology series represents the gold-standard."—Neuroscience

Product details

  • Edition: 1
  • Latest edition
  • Volume: 580
  • Published: August 27, 2016
  • Language: English

About the editor

VP

Vincent L Pecoraro

John T. Groves Collegiate Professor of Chemistry, Department of Chemistry, University of Michigan, USA
Affiliations and expertise
Department of Chemistry, University of Michigan, MI, USA

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