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Biotechnology Engineering

A Practical Approach on Bioprocess Development from Lab to Industrial Scale

  • 1st Edition - August 26, 2025
  • Latest edition
  • Editors: Vinayaka B. Shet, Sandesh Kanthakere, Nabisab Mujawar Mubarak, Rama Rao Karri, Mohammad Hadi Dehghani
  • Language: English

Biotechnology Engineering: A Practical Approach on Bioprocess Development from Lab to Industrial Scale offers a comprehensive guide on biotechnology engineering, focusing on transf… Read more

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Description

Biotechnology Engineering: A Practical Approach on Bioprocess Development from Lab to Industrial Scale offers a comprehensive guide on biotechnology engineering, focusing on transforming research and development into commercially viable industrial processes. The book addresses the needs of the market by providing structured chapters, practical methods, and real-world case studies. Readers will gain valuable insights into bioprocessing basics, scalable solutions, optimization techniques, and collaboration opportunities. The text also covers essential regulatory compliance information, bridging the gap between theoretical knowledge and practical applications.

The book is a vital resource for academics, scientists, engineers, and professionals in bioprocess development. It includes detailed discussions, calculations, and case studies, modern bioreactors, and software tools used in the industry. Serving as a desktop reference, it effectively combines theory with real-world applications to support the development of bioprocesses on all scales.

Key features

  • Helps readers understand the practical approach involved in bioprocess developments
  • Includes calculations and case studies that are essential for independently scaling up bioprocesses, from Erlenmeyer flask studies to bioreactors
  • Provides insights into auditing requirements for the bioprocess industry

Readership

Researchers in academia and industry and graduate students in bioprocess scale-up, bioreactor designing and biotechnology engineering

Table of contents

PART A: Cell culture and Kinetic study

1: Culturing of microbial, animal and plant cells in lab scale

1.1 Introduction to Cell Culturing Techniques

1.2 Microbial Cell Culture: Techniques and Methods

1.3 Animal Cell Culture: Techniques and Methods

1.4 Plant Cell Culture: Techniques and Methods

1.5 Growth Kinetics and Cell Counting: Calculations for Assessment and Analysis

1.6 Conclusions and References


2: Microbial growth and cell kinetics

2.1 Introduction

2.2 General mass balance, elemental balance, and heat balance calculations with respect to fermenter/bioreactor

2.3 Microbial growth and production (linear growth equation, yield values), Enzymatic conversion

2.4 Kinetic Calculations: Growth, Substrate Utilization, and Product Formation

2.5 Application of Kinetic Models in Bioprocess Development

2.6 Case Studies and Examples of Material Balance and Kinetic Calculations

2.7 Conclusions and References


3: Design, optimization, and Inoculum development for culturing the cells

3.1 Basics of Media Design for Cell Culturing

3.2 Optimization Techniques for Media Formulation

3.3 Inoculum Development Strategies

3.4 Calculations and Considerations for Inoculum Scaling

3.5 Case Studies and Examples of Media Design and Inoculum Development

3.6 Conclusions and References


4: Lab scale studies on Submerged Liquid Fermentation (SLF) and Solid State Fermentation (SSF)

4.1 Introduction to Submerged Liquid Fermentation (SLF)

4.2 Lab Scale Studies and Experimental Setup for SLF

4.3 Key Parameters and Calculations in SLF

4.4 Introduction to Solid State Fermentation (SSF)

4.5 Lab Scale Studies and Experimental Setup for SSF

4.6 Comparative Analysis of SLF and SSF: Advantages and Limitations

4.7 Conclusions and References

PART B: Bioreactor handling and operation

5: Fundamental of Bioreactors and accessories

5.1 Introduction to Bioreactors: Types and Classification

5.2 Components and Functioning of Bioreactors

5.3 Measurement and Control Instruments in Bioreactors

5.4 Sensors and Probes for Monitoring Bioreactor Parameters

5.5 Auxiliary Equipment and Accessories in Bioreactor Systems

5.6 Conclusions and References


6: Design Aspects and Aseptic Maintenance of Bioreactors

6.1 Introduction

6.2 Bioreactor Design Considerations: Vessel Geometry and Configuration

6.3 Aseptic Design Principles for Bioreactors

6.4 Sterility Assurance and Maintenance in Bioreactor Systems

6.5 Cleaning and Sterilization of Bioreactor Components

6.6 Validation and Documentation of Aseptic Conditions in Bioreactors

6.7 Conclusions and References


7: Cleaning Techniques for Bioreactors and Regulatory Standards

7.1 Introduction

7.2 Importance of Cleaning in Bioreactor Operations

7.3 Cleaning Agents and Disinfectants for Bioreactors

7.4 Cleaning Validation Protocols and Procedures

7.5 Regulatory Standards for Bioreactor Cleaning

7.6 Case Studies and Best Practices for Effective Bioreactor Cleaning

7.7 Conclusions and References


8: Bioreactor sterilization techniques and equipment

8.1 Introduction

8.2 Principles and Importance of Bioreactor Sterilization

8.3 Sterilization Methods for Bioreactors: Heat, Chemical, and Radiation

8.4 Equipment and Tools for Bioreactor Sterilization

8.5 Sterility Testing and Monitoring in Bioreactors

8.6 Case Studies and Troubleshooting in Bioreactor Sterilization

8.7 Conclusions and References


9: Standard Operating Procedures and Auditing in Bioprocess Industries

9.1 Introduction

9.2 Importance of Standard Operating Procedures (SOPs)

9.3 Development and Implementation of SOPs in Bioprocess Industries

9.4 Auditing and Compliance with Good Manufacturing Practices (GMP)

9.5 Documentation and Record-Keeping in Bioprocess Operations

9.6 Continuous Improvement and Quality Management Systems in Bioprocessing

9.7 Conclusions and References


10: Operation and control of Submerged Liquid Fermenters

10.1 Introduction

10.2 Overview of Submerged Liquid Fermenters (SLFs)

10.3 Operational Parameters and Control Strategies in SLFs

10.4 Monitoring and Adjustment of Bioreactor Conditions

10.5 Strategies for Scaling Up SLF Processes

10.6 Case Studies and Troubleshooting in SLF Operation and Control

10.7 Conclusions and References


11: Operation and control of submerged solid fermenters

11.1 Introduction

11.2 Overview of Submerged Solid Fermenters (SSFs)

11.3 Operational Parameters and Control Strategies in SSFs

11.4 Monitoring and Adjustment of Bioreactor Conditions

11.5 Strategies for Scaling Up SSF Processes

11.6 Case Studies and Troubleshooting in SSF Operation and Control

11.7 Conclusions and References


12: Equipment for downstream Product Recovery and Purification

12.1 Introduction to Product Recovery and Purification Processes

12.2 Types of Equipment for Product Recovery

12.3 Equipment for Product Purification: Separation and Purification Techniques

12.4 Criteria for Equipment Selection in Recovery and Purification Processes

12.5 Case Studies and Examples of Equipment Selection for Product Recovery and Purification

12.6 Conclusions and References


13: Modern Reactors and Software Tools in Bioprocess Development

13.1 Introduction

13.2 Evolution of Bioreactors: From Conventional to Modern Reactors

13.3 Single-Use Reactors: Advantages and Applications

13.4 Variable Volume Reactors: Benefits and Design Considerations

13.5 Software Tools for Bioprocess Development and Optimization

13.6 Integration of Modern Reactors and Software Tools: Case Studies and Future Trends

13.7 Conclusions and References

PART C: Bioreactor Scale up aspects and case studies

14: Scale-Up Rules and Reactor Accessories

14.1 Introduction to Scale-Up in Bioprocess Engineering

14.2 Principles and Considerations for Scale-Up

14.3 Rules and Guidelines for Successful Scale-Up

14.4 Reactor Accessories and Upgrades for Large-Scale Operations

14.5 Calculation of Scale-Up Parameters and Scaling Factors

14.6 Conclusions and References


15: Scale-Up Strategies for Submerged Liquid Fermentation

15.1 Overview of Scale-Up in SLF Processes

15.2 Scale-Up Considerations and Challenges in SLF

15.3 Strategies for Lab-Scale to Large-Scale SLF

15.4 Calculation of Key Parameters in SLF Scale-Up

15.5 Case Studies and Examples of SLF Scale-Up with Detailed Calculations

15.6 Conclusions and References


16: Scale-Up Strategies for Solid State Fermentation

16.1 Overview of Scale-Up in SSF Processes

16.2 Scale-Up Considerations and Challenges in SSF

16.3 Strategies for Lab-Scale to Large-Scale SSF

16.4 Calculation of Key Parameters in SSF Scale-Up

16.5 Case Studies and Examples of SSF Scale-Up with Detailed Calculations

16.6 Conclusions and References


17: Scale-Up Constraints from Lab Scale to Industrial Scale

17.1 Limitations and Challenges in Scaling Up from Lab to Industrial Scale

17.2 Factors Affecting Scale-Up Constraints in Bioprocesses

17.3 Process Validation and Optimization for Industrial-Scale Operations

17.4 Strategies to Address Scale-Up Constraints and Mitigate Risks

17.5 Case Studies and Lessons Learned in Lab-to-Industrial Scale-Up

17.6 Conclusions and References

PART D: Bioproducts

18: Commercial Bioproducts from Bioreactors

18.1 Introduction to Commercial Bioproducts

18.2 Biopharmaceuticals: Vaccines, Antibodies, and Therapeutic Proteins

18.3 Industrial Enzymes: Applications and Market Impact

18.4 Biofuels and Biochemicals: Production and Market Trends

18.5 Specialty Chemicals and Consumer Goods: Bioplastics and Biopolymers

18.6 Case Studies and Success Stories of Commercial Bioproducts

18.7 Conclusions and References


19: Bioproducts from Fermentation and their Economic Impact

19.1 Overview of Bioproducts from Fermentation Processes

19.2 Bioproducts in the Global Economy: Market Size and Growth

19.3 Economic Impact of Bioproducts in Various Industries

19.4 Sustainability and Green Bioproducts: Environmental Benefits

19.5 Future Prospects and Emerging Trends in Bioproduct Development

19.6 Conclusions and References


20: Manufacturing Techniques for Bioproducts

20.1 Introduction to Manufacturing Processes for Bioproducts

20.2 Upstream Processing: Fermentation and Cell Culturing

20.3 Downstream Processing: Separation, Purification, and Formulation

20.4 Process Optimization and Scale-Up in Bioproduct Manufacturing

20.5 Emerging Technologies and Innovative Manufacturing Approaches

20.6 Quality Control and Regulatory Considerations in Bioproduct Manufacturing

20.7 Conclusions and References

Product details

  • Edition: 1
  • Latest edition
  • Published: August 26, 2025
  • Language: English

About the editors

VS

Vinayaka B. Shet

Dr. Vinayaka B Shet is an Associate Professor in the Department of Biotechnology Engineering, NMAMIT, off-campus centre, Nitte (Deemed to be university), Nitte, Karnataka, India. He holds a Ph.D. in Biotechnology from VTU Belgavi, an M.Tech. in Industrial Biotechnology from the National Institute of Technology Karnataka (NITK), and a B.E. in Biotechnology from P.A. College of Engineering, Mangaluru. He has over 18 years of experience in Academics, 10 years in Research, and 1 year in Industry. He received a young researcher award. He has published over 30 research articles and 10 book chapters and holds two Indian patents. He is a reviewer of various journals. He serves as Coordinator (Accreditation and Compliance) at Nitte (Deemed to be University), Mangaluru, India.

Affiliations and expertise
Assistant Professor, Department of Biotechnology Engineering, NMAMIT, Nitte, Karnataka, India

SK

Sandesh Kanthakere

Dr. Sandesh K is an Assistant Professor in the Department of Biotechnology Engineering, NMAMIT, off-campus centre, Nitte (Deemed to be university), Nitte, Karnataka, India. He holds a Ph.D. in Biotechnology from VTU Belgavi, and M.Tech. in Chemical Plant Design from the National Institute of Technology Karnataka (NITK), and B.E. in Chemical from B.M.S. College of Engineering, Bengaluru. He has over 14 years of experience in Academics and Research. He has many international and national publications in reputed journals and book chapters. He holds few Indian patents in his area of research. He is a reviewer of various journals.
Affiliations and expertise
Assistant Professor, Department of Biotechnology Engineering, NMAMIT, Nitte, Karnataka, India

NM

Nabisab Mujawar Mubarak

Dr. Nabisab Mujawar Mubarak is an Associate Professor in the Department of Chemical Engineering, College of Engineering, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia.He is a scientific reviewer for numerous Chemical Engineering andNanotechnology journals. In research, Dr.Mubarak has published over 450 journal papers and 40 conference proceedings, authored 85 book chapters, and has an H-index of 87. His areas of interest include the synthesis of carbon nanomaterials, the production of magnetic biochar using microwaves, and wastewater treatment utilizing advanced materials. He received the Curtin Malaysia Most Productive Research Award, the Outstanding Faculty of Chemical Engineering Award, the Best Scientific Research Award in London, and the Exceptional ScientistAward in publication and citation by i-Proclaim, Malaysia. Since 2020, he has also been listed among the top 2% of the world’s most influential scientists in the fields of chemistry and energy. The List of the Top 2% of Scientists in the World, compiled and published by Stanford University, is based on international scientific publications, the number of scientific citations for research, and participation in the review and editing of scientific research. Dr. Mubarak is a Fellow Member of the Institution of Engineers Australia, a Chartered Professional Engineer of The Institution of Engineers Australia, and a Chartered Chemical Engineer of the Institute of Chemical Engineering, UK. He has published 11 books and is coeditor for ongoing Elsevier-edited books: 1) Nanomaterials for Carbon Capture and Conversion Technique, 2) Advanced Nanomaterials and Nanocomposites for Bioelectrochemical Systems, 3) Water Treatment Using Engineered Carbon Nanotubes,4) Hybrid Nanomaterials for Sustainable Applications: Case Studies and Applications, 5), Sustainable Nanotechnology for Environmental Remediation, 6) Nanotechnology for Biomedical Applications,7) Nanotechnology for Electronic Applications, 8) Application of Bio-Additives for the Food Industry, 9) Contemporary Nanomaterials inMaterial Engineering Applications, 10)Fundamentals of Biomaterials: ASupplementary Textbook, 11) EmergingWater Pollutants: Concerns and Remediation Technologies.
Affiliations and expertise
Associate Professor at the Faculty of Engineering, Univercity Technology Brunei, Brunei Darussalam

RK

Rama Rao Karri

Rama Rao Karri is an Associate Professor in the Faculty of Engineering at Universiti Teknologi Brunei. He holds a PhD from IIT Delhi and a Master’s from IIT Kanpur in Chemical Engineering. With over 20 years of experience in academia, industry, and research, he has experience working in multidisciplinary fields and has expertise in various evolutionary optimization techniques and process modelling. His expertise extends to process modeling and simulation, focusing on optimizing chemical and environmental processes to improve efficiency and sustainability. He serves on editorial boards of several international journals and acts as a peer reviewer for numerous reputed publications. He has held editorial roles including Editor-in-Chief and Associate Editor for journals such as Scientific Reports and the International Journal of Energy and Water Resources. He is also a guest editor for special issues on nanocomposites and environmental engineering topics. Additionally, he contributes to authoring and editing books on sustainable technologies, environmental remediation, and process monitoring with leading academic publishers. He also has the distinction of being listed in the Top 2% of the world’s most influential scientists in the area of environmental sciences and chemical engineering since 2021, compiled and published by Stanford University.

Affiliations and expertise
Professor, Faculty of Engineering, University of Technology of Brunei, IUniversiti Teknologi Brunei, Brunei Darussalam

MH

Mohammad Hadi Dehghani

Prof. Dr. Mohammad Hadi Dehghani is a full professor at the Tehran University of Medical Sciences (TUMS), School of Public Health, Department of Environmental Health Engineering, Tehran, Islamic Republic of Iran. His scientific research interests include environmental science. He is the author of various research studies published in national and international journals and conference proceedings and head of several research projects at the TUMS. He has authored 20 books, 26 book chapters and more than 270 full papers published in peer-reviewed journals. He is an editorial board member, guest editor, and reviewer in many internal and international journals and a member of several international science committees worldwide. He also has the distinction of being listed in the top 2% of the world’s most influential scientists in the area of environmental sciences. He is a supervisor and advisor for many PhD and MSc theses at the TUMS. He is currently also a member of the Iranian Association of Environmental Health (IAEH) and member of the Institute for Environmental Research (IER) at the TUMS. He is an editor for 14 edited books (English): (1) Soft Computing Techniques in Solid Waste and Wastewater Management, (2) Environmental and Health Management of Novel Coronavirus Disease (COVID-19), (3) Green Technologies for the Defluoridation of Water, (4) Pesticide Remediation Technologies From Water and Wastewater, (5) COVID-19 and Sustainable Development Goals, (6) Industrial Wastewater Treatment: Emerging Technologies for Sustainability, (7) Sustainable Materials for Sensing and Remediation of Noxious Pollutants, (8) Wastewater-Based Epidemiology for the Assessment of Human Exposure to Environmental Pollutants, (9) Water Treatment Using Engineered Carbon Nanotubes, (10) Water, the Environment and the Sustainable Development Goals, (11) Sustainable Remediation Technologies for Emerging Pollutants in Aqueous Environment, (12) Health and Environmental Effects of Ambient Air Pollution, (13) Health Effects of Indoor Air Pollution, (14) Diseases Attributed to Air Pollution.

Affiliations and expertise
Professor, Tehran University of Medical Sciences (TUMS), School of Public Health, Department of Environmental Health Engineering, Tehran, Iran

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