Rhizobiome

Ecology, Management and Application

1st Edition - July 26, 2023
Editors: Javid A. Parray, Nowsheen Shameem, Dilfuza Egamberdieva, Riyaz Z. Sayyed
Language: English
Paperback ISBN:
9 7 8 - 0 - 4 4 3 - 1 6 0 3 0 - 1
eBook ISBN:
9 7 8 - 0 - 4 4 3 - 1 6 0 3 1 - 8

Rhizosphere: Ecology, Management and Application highlights the use of the rhizosphere microbiome to improve plant and soil health, including strengthening stress resistanc… Read more

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Rhizosphere: Ecology, Management and Application highlights the use of the rhizosphere microbiome to improve plant and soil health, including strengthening stress resistance and remediating negatively impacted soils. The book focuses on current developments and applications of related low input management strategies in high-value crops as well as non-food plants. Further sections provide insights into the ecology and functions of these interactions, including evidence that plant microbiota is vital for plant growth and stress resilience and health. It highlights fundamental microbiome research to help readers better understand the dynamics within microbial communities and their interactions with various plant hosts and the environment.

Microbial-root associations are essential to assist plants under abiotic and biotic stresses and are necessary and beneficial to enhancing agricultural crop production. Numerous studies have enhanced our vision of the complex interactions between the plant, the associated microbial communities, and the environment. Further, microbe – microbe interactions allow the simulation microbial community interactions naturally, and is one of the many modern methods for the development of novel and effective metabolites.

Cover image
Title page
Table of Contents
Copyright
Chapter 1. Diversity of various symbiotic associations between microbes and host plants
1. Introduction
2. Categories of symbionts
3. Plant supplement carriers for arbuscular mycorrhizal beneficial interaction
4. Inescapable herbivore-symbiont ventures into sap-taking care of specialties
5. Dynamic capability of the coordinated bug microorganism amino corrosive digestion
Chapter 2. Amelioration of biotic stress by using rhizobacteria for sustainable crop produce
1. Introduction
2. PGPRs systemic effects on the functioning and physiology of plant
3. The effect of plant and rhizobacteria interaction on secondary metabolites
4. Impact of plant growth and development regulators on root architecture
5. Stimulating the defense reaction of rhizobacteria in plants
6. Plant defense with biocontrol agents
7. Conclusions and future perspectives
Chapter 3. Microorganisms as salient tools in achieving ecosystem approaches
1. Introduction
2. Impact of human and other interactions on ecosystem and climate change
3. Soil microbes
4. Impact of different class of microbes on climate change
5. Ecosystem approaches
6. Microbes as the tools for achieving ecosystem approaches
7. Conclusion
Chapter 4. Role of rhizobacterial volatile compounds in increasing plant tolerance to biotic and abiotic stresses
1. Introduction
2. Volatile organic compounds
3. Volatile organic compounds producing rhizobacteria
4. Different type of volatile organic compound
5. Phytopathogens targeted by PGPR VOCs
6. Antibiosis of volatile organic compound
7. Alcohol compounds
8. Ketone and aldehyde compounds
9. Alkanes and alkenes compounds
10. Sulfur compounds
11. Volatile organic compound against abiotic stress
12. Defense against water loss
13. Enhancement of sulfur acquisition
14. Optimization of iron homeostasis
Chapter 5. Bioremediation potential of rhizosphere microbes—current perspectives
1. Introduction
2. Bioremediation
3. Techniques employed in bioremediation
4. Plant bacteria interactions in rhizoremediation
5. Rhizoremediation of PET and PLA plastics
6. Conclusions
Chapter 6. Plant growth promoting rhizobacteria (PGPR): an overview for sustainable agriculture and development
1. Introduction
2. Rhizosphere
3. Chemical fertilizers
4. Biofertilizers
5. Other applications
6. Conclusion
Chapter 7. Rhizospheric microbiome: organization and bioinformatics studies
1. Introduction
2. Bioinformatics
3. Bioinformatics impact on genomics
4. Bioinformatic tools
5. Bioinformatic resources and platforms for plant microbes interaction study
6. Proteomics
7. Recent and new approaches to study plant-microbe interactions
8. Conclusion
Chapter 8. Microbiome biodiversity—current advancement and applications
1. Introduction
2. Rhizosphere microbiota
3. Ecology
4. Rhizosphere microbiome assembly and its impact on plant growth
5. Rhizosphere differentials that affect the microbial community assembly
6. Plant growth variations—microbiome assembly and root metabolism
7. Biochemical mediators in plant growth promoting microorganisms
8. Plant disease-resisting microorganisms (PDRM)
9. Management of rhizosphere microbiota
10. Holobiont-based control of rhizospheric biota
11. Impact of plant-friendly, plant-pathogenic, and human-pathogenic microbes
12. Conclusion and future outlook
Chapter 9. Multifunctional growth-promoting microbial consortium-based biofertilizers and their techno-commercial feasibility for sustainable agriculture
1. Introduction
2. Beneficial microbes as active ingredients of microbial consortia
3. Microbial consortia
4. Carrier materials for microbial consortia
5. Regulatory framework for commercialization of microbial consortium biofertilizers
6. Multifunctional plant growth-promoting attributes of microbial consortia on different crops
7. Challenges and constraints with microbial consortia–based biofertilizers
8. Conclusion and future perspectives
Chapter 10. Nutrition and cultivation strategies of core rhizosphere microorganisms
1. Introduction
2. Members of rhizomicrobiome
3. Bacteria
4. Fungi
5. Others
6. Why rhizospheric microbiome is important?
7. Nutritional strategies for beneficial rhizospheric microbes
8. Cultivation strategies for beneficial rhizospheric microbes
9. Azospirillum
10. Azotobacter
11. Bacillus
12. Enterobacter
13. Frankia
14. Klebsiella
15. Methylobacterium
16. Pseudomonas
17. Rhizobium
18. Streptomyces
19. Aspergillus
20. Metarhizium
21. Penicillium
22. Trichoderma
23. Conclusion
Chapter 11. Bioengineering of rhizobiome toward sustainable agricultural production
1. Introduction
2. Bioengineering
3. Why rhizosphere engineering for sustainable agriculture?
4. Rhizosphere engineering for abiotic
5. Rhizosphere engineering for biotic stress
6. Conclusions and future outlook
Chapter 12. Bioinformatics study to unravel the role of rhizobiome to biologically control the pathogens in vegetables
1. Introduction
2. Conclusion
Chapter 13. Azospirillum—a free-living nitrogen-fixing bacterium
1. Diazotrophic (nitrogen-fixing) population
2. Modes of action
3. Measurement/quantification
4. The nonsymbiotic N2-fixation-related factors
5. Plants and other creatures actualized nitrogen from diazotrophs
6. Extending the utility of nonsymbiotic N2-fixation
7. Conclusion
Chapter 14. Plant-microbe interactions: different perspectives in promoting plant growth and health
1. Introduction
2. Plant-microbe interactions: a dynamic association
3. Plant-microbe interactions in enhancing plant growth and health
4. Perspectives on plant productivity in a different scenario
5. Future prospects
Chapter 15. Recent advances in discovery of new drugs from plants-associated microbes
1. Introduction
Chapter 16. Plant health: Feedback effect of root exudates and rhizobiome interactions
1. Introduction
2. Rhizosphere and rhizobiome: a dynamic system
3. Role of rhizobiome in plant health
4. Rhizobiome contributes to limiting nutrient acquisition
5. Root exudates: the spray of chemical signals
6. Root exudation transport mechanism
7. Factors affecting root exudate profile
8. Root exudates and rhizobiome: synergistic influence on plant health
9. Future viewpoints
10. Summary
Chapter 17. Ecotypic adaptation of plants and the role of microbiota in ameliorating the environmental extremes using contemporary approaches
1. Introduction
2. Plant ecotype and the associated microbiota
3. Secondary metabolites associated with microbiota
4. Mechanism of action (nutritional absorption and plant health)
5. Nutritional absorptions by bacteria
6. Nutritional absorptions by fungi
7. Role of the microbiota in amelioration of environmental extremes
8. Conclusion and future prospect
Chapter 18. Ecological and structural attributes of soil rhizobiome improving plant growth under environmental stress
1. Introduction
2. Drought stress
3. Salinity stress
4. Abscisic acid hormone (ABA)
5. Properties and potential of plant growth promoting rhizobacteria (PGPR)
6. Siderophores
7. Phosphate solubilization
8. Nitrogen fixation
9. Auxins, cytokinins, gibberellins
10. ACC Deaminase
11. Effectiveness of PGPR in hydrocarbons and heavy metals contaminated soils
12. PGPR to face salinization and drought facing the abiotic stresses
13. Water phytodepuration—constructed wetlands (CW)
Chapter 19. Modulation of rhizosphere microbial populations using Trichoderma-based biostimulants for management of plant diseases
1. Introduction
2. Improvement of soil nutrient uptake
3. Adaptation under different climatic conditions
4. Response to plant pathogens
5. Trichoderma-based biostimulants
6. Conclusion
Chapter 20. Multiomics analysis of rhizosphere and plant health
1. Introduction
2. Rhizospheric microbe metabolomics
3. Metabolomics uses
4. Metabolomics challenges
5. Multiomics investigation on an agroecosystem demonstrates organic nitrogen's function in increasing crop output
6. NGS of rhizospheric microbes
7. Mass spectrometry (MS)
8. Rhizospheric metaproteomics
9. Conclusions
Chapter 21. Chemical profiling of metabolites of Bacillus species: A case study
1. Introduction
2. Chemical extraction and isolation of natural products
3. Antifungals
4. Antibacterials
5. Plant growth promoting compounds
6. Conclusions
Chapter 22. Achievements of Professor Hiltner vis a vis the contributions toward rhizosphere science
1. Introduction
2. Rhizosphere science
3. Lorenz Hiltner
4. Rhizosphere soil
5. Beneficial microorganisms near the rhizosphere region
6. Group of microorganisms near the rhizosphere region
7. Factors affecting microbial population in the rhizosphere region
8. Conclusion
Index

Javid A. Parray

Javid A Parray is currently teaching at the Department of Environmental Science, GDC Eidgah, affiliated to Cluster University, Srinagar. His research interests include ecological and agricultural microbiology, climate change, microbial biotechnology, and environmental microbiomes.

Affiliations and expertise

Govt. Degree College, Eidgah, Srinagar, Department of Higher Education J&K Govt, Centre of Research for Development, University of Kashmir, India

Nowsheen Shameem

Nowsheen Shameem presently works as an assistant professor in the Department of Environmental Science Cluster University Srinagar, Jammu and Kashmir, India. She worked as project associate in a DBT Sanctioned project entitled “Spawn Production for the Entrepreneurs of Kashmir Valley” at CORD, University of Kashmir. Dr. Shameem has a strong interest in studying mushroom biology, bioactivity, and medicinal chemistry. She has dealt with bioactivities of endemic/threatened medicinal plants of Kashmir valley and other applied microbiology aspects, and has published many research articles in reputed, referred, international and national journals.

Affiliations and expertise

Cluster University, Srinagar, J&K India, India

Dilfuza Egamberdieva

Dilfuza Egamberdieva is a research associate at the Centre of Agricultural Landscape Research, Germany and head of Joint Uzbek-China Key Lab of Ecobiomes of Arid Lands, National University of Uzbekistan. Her research interests include microbial ecology and diversity, plant-microbe interaction, plant nutrition and stress tolerance, and plant biological disease control. She has been awarded the SCOPUS-2019 Award “Top Scientist of the Year”, TWAS (The World Academy of Science) Award in Agricultural Sciences (2013), and TWAS-TWOWS-SCOPUS Young Women Research Award (2009), as well as several Fellowships such as President’s International Fellowship for Visiting Professors (PIFI), The Chinese Academy of Sciences (CAS), and the Georg Forster Research Fellowships, Alexander von Humboldt Foundation. She is a member of several journals’ editorial board, authored seven books published by Elsevier and Springer, and co-authored over 200 publications in per reviewed journals.

Affiliations and expertise

Land Use and Governance, Leibniz Centre for Agricultural Landscape Research (ZALF), Germany

Riyaz Z. Sayyed

Prof. Riyaz Z Sayyed is a Professor and Head, Department of Microbiology, PSGVP Mandal’s Arts, Science College, Shahada, India. Currently, he serves as the President of the India chapter of the Asian PGPR Society for Sustainable Agriculture (Estd 2019). To his credit, he has received the Fellow Indian Phytopathological Society Award (2021), Best Teachers Award, Young Scientist Award (2005, 2008, and 2012), Prof M M Sharma Award, Springer-Society Award (2020), Award for Excellence in PGPR Research (2017, 2018, 2019). He is Associate Editor of Environmental Sustainability (Springer) and Guest editor of Sustainability (MDPI), Academic Editor of Plos One, Frontiers in Microbiology and Peer J . He has over 25 years of teaching and 20 years of research experience in Microbiology and Biotechnology. He has authored and co-authored over 250 research papers in high IF international journals as well as multiple books and chapters. He has delivered many invited talks at several Southeast Asian and European Countries.

Affiliations and expertise

Professor and Head, Department of Microbiology, PSGVPM'S ASC College,  SHAHADA, India